easyGWAS - Detailed SNP View

Brief Summary

Experiment Type:

Genome-wide Association Study

Species:

Helianthus petiolaris subsp. fallax

Dataset:

Helianthus petiolaris subsp. fallax. SNPs remapped to HA412-HOv2

Phenotype:

Leaf height mid-width (ID: PETfal rm216P29)

Algorithm:

EMMAX

Parameters:

Detailed SNP View (Ha412HOChr10: 57978792)

« Back to Manhattan Plots

Download Detailed Table with Allele and Phenotype Information for SNP (Ha412HOChr10: 57978792):

Change Y-Axis to -log10(p-value) (Strength of association) Change Y-Axis to R2 (Strength of LD)

Variant Effect Predictor (VEP) Effects (via ENSEMBL REST Services) (Ha412HOChr10: 57978792)

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